miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37802_tca-mir-317:mirbase
Length = 77
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 ggcggtgctggggaccaccctgtgtttactctgtatttcgaccagtgaacacagctggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcggtgctggggaccaccctgtgtttactctgtatttcgaccagtgaacacagctggtg 60
Query: 61 gtatctcagtttcttcc 77
|||||||||||||||||
Sbjct: 61 gtatctcagtttcttcc 77
>35394_ame-mir-317:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 45 gtgaacacagctggtggtatctcagttt 72
||||||||||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatctcagttt 81
>35567_bmo-mir-317:mirbase
Length = 92
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatctcagtt 71
||||||||||||||||||||||||||||
Sbjct: 53 agtgaacacagctggtggtatctcagtt 80
>37592_ngi-mir-317:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 45 gtgaacacagctggtggtatctcagttt 72
||||||||||||||||||||||||||||
Sbjct: 51 gtgaacacagctggtggtatctcagttt 78
>37669_nvi-mir-317:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 45 gtgaacacagctggtggtatctcagttt 72
||||||||||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatctcagttt 81
>35227_aae-mir-317-1:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatctcagt 70
|||||||||||||||||||||||||||
Sbjct: 53 agtgaacacagctggtggtatctcagt 79
>35228_aae-mir-317-2:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatctcagt 70
|||||||||||||||||||||||||||
Sbjct: 51 agtgaacacagctggtggtatctcagt 77
>36047_cqu-mir-317:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatctcagt 70
|||||||||||||||||||||||||||
Sbjct: 53 agtgaacacagctggtggtatctcagt 79
>35032_dpu-mir-317:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 45 gtgaacacagctggtggtatctcagt 70
||||||||||||||||||||||||||
Sbjct: 60 gtgaacacagctggtggtatctcagt 85
>38776_cte-mir-317:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 45 gtgaacacagctggtggtatctc 67
|||||||||||||||||||||||
Sbjct: 60 gtgaacacagctggtggtatctc 82
>35087_api-mir-317:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatct 66
|||||||||||||||||||||||
Sbjct: 55 agtgaacacagctggtggtatct 77
>35315_aga-mir-317:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatctcagt 70
|||||||||| ||||||||||||||||
Sbjct: 54 agtgaacacatctggtggtatctcagt 80
>38886_lgi-mir-317:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 45 gtgaacacagctggtggtatct 66
||||||||||||||||||||||
Sbjct: 60 gtgaacacagctggtggtatct 81
>34987_isc-mir-317:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 gtgaacacagctggtggtatctcagt 70
|||||||||||||||||||| |||||
Sbjct: 60 gtgaacacagctggtggtatatcagt 85
>36146_dan-mir-317:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatc 65
||||||||||||||||||||||
Sbjct: 53 agtgaacacagctggtggtatc 74
>36228_der-mir-317:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatc 65
||||||||||||||||||||||
Sbjct: 54 agtgaacacagctggtggtatc 75
>36311_dgr-mir-317:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatc 65
||||||||||||||||||||||
Sbjct: 54 agtgaacacagctggtggtatc 75
>36471_dme-mir-317:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatc 65
||||||||||||||||||||||
Sbjct: 54 agtgaacacagctggtggtatc 75
>36472_dme-mir-317:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatc 65
||||||||||||||||||||||
Sbjct: 54 agtgaacacagctggtggtatc 75
>36817_dmo-mir-317:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatc 65
||||||||||||||||||||||
Sbjct: 51 agtgaacacagctggtggtatc 72
>36892_dpe-mir-317-1:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatc 65
||||||||||||||||||||||
Sbjct: 53 agtgaacacagctggtggtatc 74
>36893_dpe-mir-317-2:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatc 65
||||||||||||||||||||||
Sbjct: 53 agtgaacacagctggtggtatc 74
>36976_dps-mir-317:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatc 65
||||||||||||||||||||||
Sbjct: 53 agtgaacacagctggtggtatc 74
>37184_dse-mir-317:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatc 65
||||||||||||||||||||||
Sbjct: 54 agtgaacacagctggtggtatc 75
>37260_dsi-mir-317:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatc 65
||||||||||||||||||||||
Sbjct: 54 agtgaacacagctggtggtatc 75
>37396_dvi-mir-317:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatc 65
||||||||||||||||||||||
Sbjct: 51 agtgaacacagctggtggtatc 72
>37473_dwi-mir-317:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatc 65
||||||||||||||||||||||
Sbjct: 52 agtgaacacagctggtggtatc 73
>37555_dya-mir-317:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agtgaacacagctggtggtatc 65
||||||||||||||||||||||
Sbjct: 54 agtgaacacagctggtggtatc 75
