miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>37805_tca-mir-750:mirbase
          Length = 92

 Score =  182 bits (92), Expect = 3e-47
 Identities = 92/92 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  agaaagcaaagggcccttgggtggaaggttggatcttcgcatgattcaagttgccagatc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  agaaagcaaagggcccttgggtggaaggttggatcttcgcatgattcaagttgccagatc 60

                                          
Query: 61 taactcttccatatgacggtcatttgccaaca 92
          ||||||||||||||||||||||||||||||||
Sbjct: 61 taactcttccatatgacggtcatttgccaaca 92




>35397_ame-mir-750:mirbase
          Length = 136

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 51  ttgccagatctaactcttcca 71
           |||||||||||||||||||||
Sbjct: 81  ttgccagatctaactcttcca 101




>38781_cte-mir-750:mirbase
          Length = 99

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 52 tgccagatctaactcttcca 71
          ||||||||||||||||||||
Sbjct: 57 tgccagatctaactcttcca 76




>34989_isc-mir-750:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 52 tgccagatctaactcttcca 71
          ||||||||||||||||||||
Sbjct: 59 tgccagatctaactcttcca 78