miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37809_tca-mir-929:mirbase
Length = 103
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 agacggccatcttaatcggggtcaaattgactctagtagggagtccgttactttatagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agacggccatcttaatcggggtcaaattgactctagtagggagtccgttactttatagcg 60
Query: 61 actccctaacggagtcaggttgactccctttgagggaaatcta 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actccctaacggagtcaggttgactccctttgagggaaatcta 103
>36479_dme-mir-929:mirbase
Length = 88
Score = 63.9 bits (32), Expect = 2e-11
Identities = 55/62 (88%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccgttactttatagcgactccctaacggagtcaggtt 81
||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||
Sbjct: 15 tcaaattgactctagtagggagtcctttaat---gagcgactccctaacggagtcagatt 71
Query: 82 ga 83
||
Sbjct: 72 ga 73
>36480_dme-mir-929:mirbase
Length = 88
Score = 63.9 bits (32), Expect = 2e-11
Identities = 55/62 (88%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccgttactttatagcgactccctaacggagtcaggtt 81
||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||
Sbjct: 15 tcaaattgactctagtagggagtcctttaat---gagcgactccctaacggagtcagatt 71
Query: 82 ga 83
||
Sbjct: 72 ga 73
>37264_dsi-mir-929:mirbase
Length = 118
Score = 63.9 bits (32), Expect = 2e-11
Identities = 55/62 (88%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccgttactttatagcgactccctaacggagtcaggtt 81
||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||
Sbjct: 33 tcaaattgactctagtagggagtcctttaat---gagcgactccctaacggagtcagatt 89
Query: 82 ga 83
||
Sbjct: 90 ga 91
>36980_dps-mir-929:mirbase
Length = 94
Score = 61.9 bits (31), Expect = 8e-11
Identities = 55/62 (88%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccgttactttatagcgactccctaacggagtcaggtt 81
||||||||||||||||||||||||| || | | |||||||||||||||||||||| ||
Sbjct: 22 tcaaattgactctagtagggagtccttt--tattgagcgactccctaacggagtcagatt 79
Query: 82 ga 83
||
Sbjct: 80 ga 81
>35401_ame-mir-929:mirbase
Length = 100
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 ggggtcaaattgactctagtagggagtcc 46
|||||||||||||||||||||||||||||
Sbjct: 9 ggggtcaaattgactctagtagggagtcc 37
>37595_ngi-mir-929:mirbase
Length = 95
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 ggggtcaaattgactctagtagggagtcc 46
|||||||||||||||||||||||||||||
Sbjct: 9 ggggtcaaattgactctagtagggagtcc 37
>37625_nlo-mir-929:mirbase
Length = 95
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 ggggtcaaattgactctagtagggagtcc 46
|||||||||||||||||||||||||||||
Sbjct: 9 ggggtcaaattgactctagtagggagtcc 37
>37673_nvi-mir-929:mirbase
Length = 100
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 ggggtcaaattgactctagtagggagtcc 46
|||||||||||||||||||||||||||||
Sbjct: 9 ggggtcaaattgactctagtagggagtcc 37
>35319_aga-mir-929:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 54/61 (88%), Gaps = 3/61 (4%)
Strand = Plus / Plus
Query: 24 aaattgactctagtagggagtccgttacttta-tagcgactccctaacggagtcaggttg 82
||||||||||||||||||||||| || | || |||||||||||||||||||||| |||
Sbjct: 16 aaattgactctagtagggagtccttt--tatacgagcgactccctaacggagtcagattg 73
Query: 83 a 83
|
Sbjct: 74 a 74
>35572_bmo-mir-929:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 aaattgactctagtagggagtccgtt 49
||||||||||||||||||||||||||
Sbjct: 5 aaattgactctagtagggagtccgtt 30
>35231_aae-mir-929-1:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 caaattgactctagtagggagtcc 46
||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcc 39
>35232_aae-mir-929-2:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 caaattgactctagtagggagtcc 46
||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcc 39
>35089_api-mir-929:mirbase
Length = 60
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 aaattgactctagtagggagtcc 46
|||||||||||||||||||||||
Sbjct: 1 aaattgactctagtagggagtcc 23
