miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37814_tca-mir-965:mirbase
Length = 104
Score = 206 bits (104), Expect = 2e-54
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1 ggcgcgctccgattggaccctggggtggaaagttgtaccgctgatggtgatttttctaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcgcgctccgattggaccctggggtggaaagttgtaccgctgatggtgatttttctaca 60
Query: 61 cataagcgtatagcttttcccctttggttccaatcacgacgatc 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cataagcgtatagcttttcccctttggttccaatcacgacgatc 104
>35574_bmo-mir-965:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 cataagcgtatagcttttcccctt 84
||||||||||||||||||||||||
Sbjct: 61 cataagcgtatagcttttcccctt 84
>36505_dme-mir-965:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 cataagcgtatagcttttcccctt 84
||||||||||||||||||||||||
Sbjct: 64 cataagcgtatagcttttcccctt 87
>36506_dme-mir-965:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 cataagcgtatagcttttcccctt 84
||||||||||||||||||||||||
Sbjct: 64 cataagcgtatagcttttcccctt 87
>36986_dps-mir-965:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 cataagcgtatagcttttcccctt 84
||||||||||||||||||||||||
Sbjct: 55 cataagcgtatagcttttcccctt 78
>37275_dsi-mir-965:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 cataagcgtatagcttttcccctt 84
||||||||||||||||||||||||
Sbjct: 55 cataagcgtatagcttttcccctt 78
>35403_ame-mir-965:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 61 cataagcgtatagcttttcccctttgg 87
|||||||||||||||||| ||||||||
Sbjct: 50 cataagcgtatagctttttccctttgg 76
>35090_api-mir-965:mirbase
Length = 61
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 taagcgtatagcttttcccctt 84
||||||||||||||||||||||
Sbjct: 40 taagcgtatagcttttcccctt 61
>35235_aae-mir-965:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 cataagcgtatagcttttccc 81
|||||||||||||||||||||
Sbjct: 50 cataagcgtatagcttttccc 70
>35321_aga-mir-965-1:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 cataagcgtatagcttttccc 81
|||||||||||||||||||||
Sbjct: 61 cataagcgtatagcttttccc 81
>35322_aga-mir-965-2:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 cataagcgtatagcttttccc 81
|||||||||||||||||||||
Sbjct: 61 cataagcgtatagcttttccc 81
>36051_cqu-mir-965:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 cataagcgtatagcttttccc 81
|||||||||||||||||||||
Sbjct: 56 cataagcgtatagcttttccc 76
>38088_smr-mir-965:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 60 acataagcgtatagcttttcccct 83
|||||||||||| |||||||||||
Sbjct: 60 acataagcgtatggcttttcccct 83
