miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>37820_tca-mir-989:mirbase
          Length = 92

 Score =  182 bits (92), Expect = 3e-47
 Identities = 92/92 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tttttgctcccaaggtcccgccactaggtcgcataacacgcattgtcaacaccgtgtgat 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tttttgctcccaaggtcccgccactaggtcgcataacacgcattgtcaacaccgtgtgat 60

                                          
Query: 61 gtgacgtagtggtatgtctaggggagttgcct 92
          ||||||||||||||||||||||||||||||||
Sbjct: 61 gtgacgtagtggtatgtctaggggagttgcct 92




>35240_aae-mir-989:mirbase
          Length = 115

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 55 tgtgatgtgacgtagtggta 74
          ||||||||||||||||||||
Sbjct: 68 tgtgatgtgacgtagtggta 87




>35326_aga-mir-989:mirbase
          Length = 131

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  tgtgatgtgacgtagtggta 74
           ||||||||||||||||||||
Sbjct: 91  tgtgatgtgacgtagtggta 110




>35576_bmo-mir-989:mirbase
          Length = 91

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 53 cgtgtgatgtgacgtagtgg 72
          ||||||||||||||||||||
Sbjct: 55 cgtgtgatgtgacgtagtgg 74




>36056_cqu-mir-989:mirbase
          Length = 102

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 55 tgtgatgtgacgtagtggta 74
          ||||||||||||||||||||
Sbjct: 65 tgtgatgtgacgtagtggta 84