miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37829_tca-mir-1000:mirbase
Length = 100
Score = 198 bits (100), Expect = 5e-52
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 acggctcggccatgatattgtcctgtcacagcagtactggttccgagttactgctgcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acggctcggccatgatattgtcctgtcacagcagtactggttccgagttactgctgcttc 60
Query: 61 gggacatgaccatggccgggcctcttggccgacgccgccc 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggacatgaccatggccgggcctcttggccgacgccgccc 100
>35329_aga-mir-1000:mirbase
Length = 93
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 12 atgatattgtcctgtcacagcagtact 38
|||||||||||||||||||||||||||
Sbjct: 12 atgatattgtcctgtcacagcagtact 38
>35245_aae-mir-1000-1:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 atattgtcctgtcacagcagtactg 39
|||||||||||||||||||||||||
Sbjct: 23 atattgtcctgtcacagcagtactg 47
>35246_aae-mir-1000-2:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 atattgtcctgtcacagcagtactg 39
|||||||||||||||||||||||||
Sbjct: 23 atattgtcctgtcacagcagtactg 47
>35581_bmo-mir-1000:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 atattgtcctgtcacagcagtact 38
||||||||||||||||||||||||
Sbjct: 15 atattgtcctgtcacagcagtact 38
>36061_cqu-mir-1000:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 atattgtcctgtcacagcagtact 38
||||||||||||||||||||||||
Sbjct: 19 atattgtcctgtcacagcagtact 42
>36577_dme-mir-1000:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 tgatattgtcctgtcacagcagta 36
||||||||||||||||||||||||
Sbjct: 13 tgatattgtcctgtcacagcagta 36
>36578_dme-mir-1000:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 tgatattgtcctgtcacagcagta 36
||||||||||||||||||||||||
Sbjct: 13 tgatattgtcctgtcacagcagta 36
>37000_dps-mir-1000:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 tgatattgtcctgtcacagcagta 36
||||||||||||||||||||||||
Sbjct: 13 tgatattgtcctgtcacagcagta 36
>37301_dsi-mir-1000:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 tgatattgtcctgtcacagcagta 36
||||||||||||||||||||||||
Sbjct: 24 tgatattgtcctgtcacagcagta 47
>35098_api-mir-1000:mirbase
Length = 65
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 atattgtcctgtcacagcagta 36
||||||||||||||||||||||
Sbjct: 1 atattgtcctgtcacagcagta 22
>35411_ame-mir-1000:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 gatattgtcctgtcacagcagtac 37
||||||||| ||||||||||||||
Sbjct: 12 gatattgtcttgtcacagcagtac 35
