miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>37830_tca-mir-1175:mirbase
          Length = 105

 Score =  208 bits (105), Expect = 6e-55
 Identities = 105/105 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgctttgatcgagctctgtaaagtaagtggagcagtggtctcttcacttggtttttatag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cgctttgatcgagctctgtaaagtaagtggagcagtggtctcttcacttggtttttatag 60

                                                        
Query: 61  tgagattcaactcctccatctcattttttgagctcgtttacaacg 105
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgagattcaactcctccatctcattttttgagctcgtttacaacg 105




>35582_bmo-mir-1175:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 54 tttatagtgagattcaactcctcca 78
          |||| ||||||||||||||||||||
Sbjct: 42 tttaaagtgagattcaactcctcca 66




>35583_bmo-mir-1175:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 54 tttatagtgagattcaactcctcca 78
          |||| ||||||||||||||||||||
Sbjct: 42 tttaaagtgagattcaactcctcca 66