miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>37833_tca-mir-2765:mirbase
          Length = 126

 Score =  250 bits (126), Expect = 2e-67
 Identities = 126/126 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaagtaccgaaattcttggatatagtgaggagtggtaactccaccaccgttggcgtgtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaaagtaccgaaattcttggatatagtgaggagtggtaactccaccaccgttggcgtgtg 60

                                                                       
Query: 61  ttgtactgccagcggtcgaggagttccttaacctcgctgtaattctccaaaggacaaggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttgtactgccagcggtcgaggagttccttaacctcgctgtaattctccaaaggacaaggt 120

                 
Query: 121 aagttg 126
           ||||||
Sbjct: 121 aagttg 126




>35629_bmo-mir-2765:mirbase
          Length = 75

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 34 tggtaactccaccaccgttggcgt 57
          ||||||||||||||||||||||||
Sbjct: 11 tggtaactccaccaccgttggcgt 34




>35253_aae-mir-2765:mirbase
          Length = 87

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 34 tggtaactccaccaccgttggcg 56
          |||||||||||||||||||||||
Sbjct: 17 tggtaactccaccaccgttggcg 39