miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38077_tca-mir-3902:mirbase
          Length = 103

 Score =  204 bits (103), Expect = 9e-54
 Identities = 103/103 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccgtcatataaccgtggttatataaccggcatattaccatggttatataaccagcatata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ccgtcatataaccgtggttatataaccggcatattaccatggttatataaccagcatata 60

                                                      
Query: 61  accatggttatataatcggcatataaccatggttatataaccg 103
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  accatggttatataatcggcatataaccatggttatataaccg 103



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                      
Query: 31 atattaccatggttatataaccagcatataaccatggttatataatcggcatataaccat 90
          |||| |||||||||||||  | |  ||||||||||||||||||  | |  ||||||||||
Sbjct: 98 atataaccatggttatatgccgattatataaccatggttatatgctggttatataaccat 39

                  
Query: 91 ggttatat 98
          ||| ||||
Sbjct: 38 ggtaatat 31