miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34968_isc-mir-87:mirbase
Length = 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 44 agtgtaggtgagcaaagtttcaggtgt 70
|||||||||||||||||||||||||||
Sbjct: 54 agtgtaggtgagcaaagtttcaggtgt 80
>38745_cte-mir-87b:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 gtaggtgagcaaagtttcaggtgt 70
||||||||||||||||||||||||
Sbjct: 57 gtaggtgagcaaagtttcaggtgt 80
>38628_ppc-mir-87:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 49 aggtgagcaaagtttcaggtgttcgagc 76
|||||||||||||||||||||| |||||
Sbjct: 59 aggtgagcaaagtttcaggtgtgcgagc 86
>38550_crm-mir-87:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 gtaggtgagcaaagtttcaggtgt 70
||||||||||||||||||||||||
Sbjct: 60 gtaggtgagcaaagtttcaggtgt 83
>38198_cbr-mir-87:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 gtaggtgagcaaagtttcaggtgt 70
||||||||||||||||||||||||
Sbjct: 57 gtaggtgagcaaagtttcaggtgt 80
>38327_cel-mir-87:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 gtaggtgagcaaagtttcaggtgt 70
||||||||||||||||||||||||
Sbjct: 57 gtaggtgagcaaagtttcaggtgt 80
>35056_api-mir-87a:mirbase
Length = 66
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 48 taggtgagcaaagtttcaggtgt 70
|||||||||||||||||||||||
Sbjct: 42 taggtgagcaaagtttcaggtgt 64
>38862_lgi-mir-87:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 49 aggtgagcaaagtttcaggtgt 70
||||||||||||||||||||||
Sbjct: 59 aggtgagcaaagtttcaggtgt 80
>35361_ame-mir-87-1:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 49 aggtgagcaaagtttcaggtgt 70
||||||||||||||||||||||
Sbjct: 68 aggtgagcaaagtttcaggtgt 89
>38941_emu-mir-87:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 ggtgagcaaagtttcaggtgt 70
|||||||||||||||||||||
Sbjct: 72 ggtgagcaaagtttcaggtgt 92
>38918_egr-mir-87:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 ggtgagcaaagtttcaggtgt 70
|||||||||||||||||||||
Sbjct: 72 ggtgagcaaagtttcaggtgt 92
>38744_cte-mir-87a:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 ggtgagcaaagtttcaggtgt 70
|||||||||||||||||||||
Sbjct: 60 ggtgagcaaagtttcaggtgt 80
>35362_ame-mir-87-2:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 ggtgagcaaagtttcaggtgt 70
|||||||||||||||||||||
Sbjct: 69 ggtgagcaaagtttcaggtgt 89
>37727_tca-mir-87a:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 ggtgagcaaagtttcaggtgt 70
|||||||||||||||||||||
Sbjct: 51 ggtgagcaaagtttcaggtgt 71
>37728_tca-mir-87a:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 ggtgagcaaagtttcaggtgt 70
|||||||||||||||||||||
Sbjct: 51 ggtgagcaaagtttcaggtgt 71
