miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38519_crm-mir-58b:mirbase
Length = 109
Score = 113 bits (57), Expect = 2e-26
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 1 gctcgtcatatccattgccctactcttcgcatctcatcacttcgtccaataccataggga 60
||||| |||||||||||||||||| |||||||||||||||||| |||| || ||| |||
Sbjct: 9 gctcgccatatccattgccctactattcgcatctcatcacttcctccagtaatataagga 68
Query: 61 tgagatcgttcagtacggcaatgga 85
|||||||||||||||||||||||||
Sbjct: 69 tgagatcgttcagtacggcaatgga 93
>38518_crm-mir-58a:mirbase
Length = 111
Score = 85.7 bits (43), Expect = 5e-18
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 12 ccattgccctactcttcgcatctcatcacttcgtccaataccatagggatgagatcg-tt 70
||||||||||||| |||||||||||||||||| |||| || ||| ||||||||||| ||
Sbjct: 22 ccattgccctactattcgcatctcatcacttcctccagtaatataaggatgagatcgttt 81
Query: 71 cagtacggcaatgga 85
|||||||||||||||
Sbjct: 82 cagtacggcaatgga 96
>38171_cbr-mir-58:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 10 atccattgccctactcttcgcatctcatcact 41
||||||||||||||| ||||||||||||||||
Sbjct: 1 atccattgccctactattcgcatctcatcact 32
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 58 ggatgagatcgttcagtacggcaatgga 85
||||||||||||||||||||||||||||
Sbjct: 56 ggatgagatcgttcagtacggcaatgga 83
