miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38172_cbr-mir-60:mirbase
          Length = 72

 Score = 71.9 bits (36), Expect = 8e-14
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                      
Query: 16 ttcttgaactggaagagtgccataaaatcatgacaaagtacgtgatattatgcacatttt 75
          ||||||| ||||||  ||| |||||||||||| | ||| ||| |||||||||||||||||
Sbjct: 1  ttcttgagctggaaaggtgacataaaatcatgtccaagcacgcgatattatgcacatttt 60

                      
Query: 76 ctagttcaagac 87
          ||||| ||||||
Sbjct: 61 ctagtccaagac 72




>38521_crm-mir-60:mirbase
          Length = 96

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                      
Query: 6  aaaccgcttgttcttgaactggaagagtgccataaaatcatgacaaagtacgtgatatta 65
          ||||||||||||||||| || |||  ||| ||||||||||||   ||  ||| |||||||
Sbjct: 1  aaaccgcttgttcttgagctagaaaggtgacataaaatcatgtataacaacgcgatatta 60

                        
Query: 66 tgcacattttctag 79
          ||||||||||||||
Sbjct: 61 tgcacattttctag 74