miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38303_cel-mir-65:mirbase
          Length = 100

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 14 tcgccgaatatgacactgaagcgttaccgaac 45
          ||||||| |||||||||||||||| |||||||
Sbjct: 10 tcgccgattatgacactgaagcgtaaccgaac 41




>38527_crm-mir-64c:mirbase
          Length = 118

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 cctcgccgaatatgacactga 32
          |||||||||||||||||||||
Sbjct: 17 cctcgccgaatatgacactga 37




>38525_crm-mir-64a:mirbase
          Length = 109

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 cctcgccgaatatgacactg 31
          ||||||||||||||||||||
Sbjct: 8  cctcgccgaatatgacactg 27