miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38180_cbr-mir-71:mirbase
Length = 77
Score = 135 bits (68), Expect = 6e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 8 ctgaacgatgaaagacatgggtagtgagacgtcggagcctcgtcgtatcactattctgtt 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ctgaacgatgaaagacatgggtagtgagacgtcggagcctcgtcgtatcactattctgtt 62
Query: 68 tttcgccg 75
||||||||
Sbjct: 63 tttcgccg 70
>38533_crm-mir-71:mirbase
Length = 120
Score = 131 bits (66), Expect = 1e-31
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 10 gaacgatgaaagacatgggtagtgagacgtcggagcctcgtcgtatcactattctgtttt 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 gaacgatgaaagacatgggtagtgagacgtcggagcctcgtcgtatcactattctgtttt 83
Query: 70 tcgccg 75
||||||
Sbjct: 84 tcgccg 89
>38105_bma-mir-71:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 5e-09
Identities = 54/62 (87%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 16 tgaaagacatgggtagtgagacgtcggagcctc---gtcgtatcactattctgtttttcg 72
|||||||||||||||||||||||| || || ||||||||||||||||||||||||
Sbjct: 21 tgaaagacatgggtagtgagacgttagaatttcaaggtcgtatcactattctgtttttcg 80
Query: 73 cc 74
||
Sbjct: 81 cc 82
>38742_cte-mir-71:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 atgaaagacatgggtagtgaga 36
||||||||||||||||||||||
Sbjct: 21 atgaaagacatgggtagtgaga 42
>39089_sme-mir-71c:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tgaaagacatgggtagtgaga 36
|||||||||||||||||||||
Sbjct: 11 tgaaagacatgggtagtgaga 31
>24665_bfl-mir-71:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tgaaagacatgggtagtgaga 36
|||||||||||||||||||||
Sbjct: 22 tgaaagacatgggtagtgaga 42
>34816_spu-mir-71:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tgaaagacatgggtagtgaga 36
|||||||||||||||||||||
Sbjct: 22 tgaaagacatgggtagtgaga 42
>34966_isc-mir-71:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tgaaagacatgggtagtgaga 36
|||||||||||||||||||||
Sbjct: 22 tgaaagacatgggtagtgaga 42
>35006_dpu-mir-71:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tgaaagacatgggtagtgaga 36
|||||||||||||||||||||
Sbjct: 22 tgaaagacatgggtagtgaga 42
>35055_api-mir-71:mirbase
Length = 62
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tgaaagacatgggtagtgaga 36
|||||||||||||||||||||
Sbjct: 1 tgaaagacatgggtagtgaga 21
>35359_ame-mir-71:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tgaaagacatgggtagtgaga 36
|||||||||||||||||||||
Sbjct: 25 tgaaagacatgggtagtgaga 45
>35532_bmo-mir-71:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tgaaagacatgggtagtgaga 36
|||||||||||||||||||||
Sbjct: 21 tgaaagacatgggtagtgaga 41
>37646_nvi-mir-71:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tgaaagacatgggtagtgaga 36
|||||||||||||||||||||
Sbjct: 26 tgaaagacatgggtagtgaga 46
>37726_tca-mir-71:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tgaaagacatgggtagtgaga 36
|||||||||||||||||||||
Sbjct: 10 tgaaagacatgggtagtgaga 30
>37725_tca-mir-71:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tgaaagacatgggtagtgaga 36
|||||||||||||||||||||
Sbjct: 10 tgaaagacatgggtagtgaga 30
>35185_aae-mir-71:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 gaaagacatgggtagtgaga 36
||||||||||||||||||||
Sbjct: 7 gaaagacatgggtagtgaga 26
>36015_cqu-mir-71:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 gaaagacatgggtagtgaga 36
||||||||||||||||||||
Sbjct: 7 gaaagacatgggtagtgaga 26
