miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38318_cel-mir-80:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 atggacactcgttcgctcagctttcgacatgattctgaacaatccgcaagcccatgttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggacactcgttcgctcagctttcgacatgattctgaacaatccgcaagcccatgttgt 60
Query: 61 tgagatcattagttgaaagccgaatgatcagagatatc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgagatcattagttgaaagccgaatgatcagagatatc 98
>38543_crm-mir-80:mirbase
Length = 100
Score = 101 bits (51), Expect = 9e-23
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 3 ggacactcgttcgctcagctttcgacatgattctgaacaatccg-caagcccatgttgtt 61
|||||||| ||||||||||||||||||||||||| |||||| || | || | ||||||||
Sbjct: 1 ggacactctttcgctcagctttcgacatgattctaaacaatacgtcgagacaatgttgtt 60
Query: 62 gagatcattagttgaaagccgaa 84
|||||||||||||||||||||||
Sbjct: 61 gagatcattagttgaaagccgaa 83
>38191_cbr-mir-80:mirbase
Length = 100
Score = 99.6 bits (50), Expect = 4e-22
Identities = 87/98 (88%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 2 tggacactcgttcgctcagctttcgacatgattctgaacaatccgcaagc-ccatgttgt 60
||||||||| ||||||||||||||||||||||||| |||||| ||| | | |||||||
Sbjct: 1 tggacactctttcgctcagctttcgacatgattctaaacaatacgctgtcgcaatgttgt 60
Query: 61 tgagatcattagttgaaagccgaatgatcagagatatc 98
|||||||||||||||||||||||| ||| ||||||||
Sbjct: 61 tgagatcattagttgaaagccgaacgattcgagatatc 98
