miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38545_crm-mir-82:mirbase
          Length = 92

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 59 tctgagatcatcgtgaaagccagttgttt 87
          |||||||||||||||||||||||||||||
Sbjct: 55 tctgagatcatcgtgaaagccagttgttt 83

>38193_cbr-mir-82:mirbase
          Length = 95

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 59 tctgagatcatcgtgaaagccagttg 84
          ||||||||||||||||||||||||||
Sbjct: 57 tctgagatcatcgtgaaagccagttg 82

>38192_cbr-mir-81:mirbase
          Length = 90

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 59 tctgagatcatcgtgaaagccagttgtt 86
          |||||||||||||||||||| |||||||
Sbjct: 55 tctgagatcatcgtgaaagctagttgtt 82

>38319_cel-mir-81:mirbase
          Length = 108

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 59 tctgagatcatcgtgaaagccagttgtt 86
          |||||||||||||||||||| |||||||
Sbjct: 65 tctgagatcatcgtgaaagctagttgtt 92

>38544_crm-mir-81:mirbase
          Length = 94

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 59 tctgagatcatcgtgaaagccagttg 84
          |||||||||||||||||||| |||||
Sbjct: 56 tctgagatcatcgtgaaagctagttg 81