miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38321_cel-mir-83:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 agcaccactcggaaccactgaatttatgtgtgtacttgacggccaacaagagcatcgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcaccactcggaaccactgaatttatgtgtgtacttgacggccaacaagagcatcgatc 60
Query: 61 tagcaccatataaattcagtaatttcgcgtcgagagct 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagcaccatataaattcagtaatttcgcgtcgagagct 98
>38546_crm-mir-83:mirbase
Length = 98
Score = 99.6 bits (50), Expect = 4e-22
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 2 gcaccactcggaaccactgaatttatgtgtgtacttgacggccaacaagagcatcgatct 61
||||||||||||| ||||| |||||||||||||||||||||| || ||||| ||||||
Sbjct: 3 gcaccactcggaaaaactgagtttatgtgtgtacttgacggcc-actcgagcaacgatct 61
Query: 62 agcaccatataaattcagtaatttcg 87
|||||||||||||||||||| |||||
Sbjct: 62 agcaccatataaattcagtattttcg 87
>38194_cbr-mir-83:mirbase
Length = 111
Score = 85.7 bits (43), Expect = 5e-18
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 2 gcaccactcggaaccactgaatttatgtgtgtacttgacggccaacaagagcatcgatct 61
|||||||||| || ||||| ||||||||||||||||||||| | || ||||| ||||||
Sbjct: 8 gcaccactcgaaaaaactgagtttatgtgtgtacttgacggcgatca-gagcaacgatct 66
Query: 62 agcaccatataaattcagt 80
|||||||||||||||||||
Sbjct: 67 agcaccatataaattcagt 85
