miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38548_crm-mir-85:mirbase
          Length = 106

 Score = 61.9 bits (31), Expect = 9e-11
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                      
Query: 15 gtcggagcccgatttttcaatagtttgaaaccagtgtacacataaatggttacaaagtat 74
          |||||||||||  ||| ||||| ||||||||||||   ||   |||||||||||||||||
Sbjct: 16 gtcggagcccgtctttccaatattttgaaaccagtactcatgcaaatggttacaaagtat 75

                             
Query: 75 ttgaaaagtcgtgctctga 93
          | |||||| ||||||||||
Sbjct: 76 tcgaaaaggcgtgctctga 94




>38196_cbr-mir-85:mirbase
          Length = 80

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 61 tggttacaaagtatttgaaaagtcgtgc 88
          |||||||||||||||||||||| |||||
Sbjct: 46 tggttacaaagtatttgaaaaggcgtgc 73