miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38325_cel-mir-86:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 cgtgtccacgccgtctaagtgaatgctttgccacagtcttcgatgttctgaaatgaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtgtccacgccgtctaagtgaatgctttgccacagtcttcgatgttctgaaatgaagcc 60
Query: 61 tgggctcagattcgcttaggccggagtttgacacggca 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgggctcagattcgcttaggccggagtttgacacggca 98
>38549_crm-mir-86:mirbase
Length = 100
Score = 105 bits (53), Expect = 6e-24
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 9 cgccgtctaagtgaatgctttgccacagtcttcgatgttctgaaatgaagcctgggctca 68
||||||||||||||||||||||||||||||||||| | | |||||||||||||||| |
Sbjct: 10 cgccgtctaagtgaatgctttgccacagtcttcgaccatgtcaaatgaagcctgggctaa 69
Query: 69 gattcgcttaggccggagttt 89
|||||||||||||||| ||||
Sbjct: 70 gattcgcttaggccggcgttt 90
>38197_cbr-mir-86:mirbase
Length = 98
Score = 85.7 bits (43), Expect = 5e-18
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 10 gccgtctaagtgaatgctttgccacagtcttcgatgttctgaaatgaagcctgggctcag 69
||||| ||||||||||||||||||||||||||||| | | | |||||||||||||| ||
Sbjct: 10 gccgtttaagtgaatgctttgccacagtcttcgatcatgtcacatgaagcctgggcttag 69
Query: 70 attcgcttaggccgg 84
|||| ||||||||||
Sbjct: 70 attcacttaggccgg 84
