miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38215_cbr-mir-239b:mirbase
Length = 112
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 8 atgcaatttttgtactacacaaaagtactg 37
|||||||||||||||| |||||||||||||
Sbjct: 11 atgcaatttttgtactgcacaaaagtactg 40
>38342_cel-mir-239a:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 9 tgcaatttttgtactacacaaaagtactgg 38
|||||||||||||||||||| | |||||||
Sbjct: 9 tgcaatttttgtactacacataggtactgg 38
>38564_crm-mir-239b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgcaatttttgtactacacaaaag 32
||||||||||||||| ||||||||
Sbjct: 10 tgcaatttttgtactgcacaaaag 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 30/32 (93%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 52 ggctcagcacttttgtggtgtgcaaaaatggc 83
|||||||||||||||| ||||||||||||||
Sbjct: 52 ggctcagcacttttgt-ctgtgcaaaaatggc 82
