miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38565_crm-mir-241:mirbase
Length = 117
Score = 65.9 bits (33), Expect = 5e-12
Identities = 71/81 (87%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 6 gtgtcaaagttgaggtaggtgcgagaaatgacggcatc-catatagtaatcgttcattgt 64
|||||||||| ||||||||||||||||||||||| | | || | | | ||||||||||||
Sbjct: 13 gtgtcaaagtagaggtaggtgcgagaaatgacggaacctcaca-aatcatcgttcattgt 71
Query: 65 ctctcagctgcttcatctgtg 85
||| ||||||||||| |||||
Sbjct: 72 ctcgcagctgcttcaactgtg 92
>38217_cbr-mir-241:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 ggtgtcaaagttgaggtaggtgcgagaaatgacg 38
|||||||||| ||||||||||| |||||||||||
Sbjct: 3 ggtgtcaaagctgaggtaggtgtgagaaatgacg 36
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 57 ttcattgtctctcagctgcttcatctgtga 86
||||||||||| ||||||||||| ||||||
Sbjct: 53 ttcattgtctcgcagctgcttcaactgtga 82
