miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38224_cbr-mir-250:mirbase
Length = 87
Score = 87.7 bits (44), Expect = 1e-18
Identities = 70/76 (92%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 5 tcttcggaccacgccttcagttgcctcgtgatccgccaaacacaataaatggacgaatca 64
||||||||||||||||||||||||||||||||||||| || | | |||||||||||||
Sbjct: 1 tcttcggaccacgccttcagttgcctcgtgatccgccgaa-tctgt-aatggacgaatca 58
Query: 65 cagtcaactgttggca 80
||||||||||||||||
Sbjct: 59 cagtcaactgttggca 74
>38574_crm-mir-250:mirbase
Length = 120
Score = 56.0 bits (28), Expect = 5e-09
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 3 ggtcttcggaccacgccttcagttgcctcgtgatccgccaaacacaataaatggacgaat 62
|||||||||||| | |||||||||| ||||||||||||| | ||| ||||||||||
Sbjct: 14 ggtcttcggaccgccccttcagttgactcgtgatccgccgactttgatatatggacgaat 73
Query: 63 cacagtca 70
||||||||
Sbjct: 74 cacagtca 81
