miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38576_crm-mir-253:mirbase
          Length = 94

 Score =  101 bits (51), Expect = 1e-22
 Identities = 66/71 (92%)
 Strand = Plus / Plus

                                                                      
Query: 21 cttttcacacacctcactaacactgaccaccgatgcatagatgttagtaggcgttgtggg 80
          |||||||||||||||||||||||| | ||| |||  ||||||||||||||||||||||||
Sbjct: 16 cttttcacacacctcactaacactaaacacagattgatagatgttagtaggcgttgtggg 75

                     
Query: 81 aagggcggcga 91
          |||||||||||
Sbjct: 76 aagggcggcga 86




>38227_cbr-mir-253:mirbase
          Length = 110

 Score = 79.8 bits (40), Expect = 4e-16
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                      
Query: 25 tcacacacctcactaacactgaccaccgatgcatagatgttagtaggcgttgtgggaagg 84
          |||||||||||||||||||| || || |||   |||||||||||||||||||||||||||
Sbjct: 26 tcacacacctcactaacactaactacagatttctagatgttagtaggcgttgtgggaagg 85

              
Query: 85 gcgg 88
          ||||
Sbjct: 86 gcgg 89