miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38234_cbr-mir-355:mirbase
          Length = 109

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 60/68 (88%), Gaps = 1/68 (1%)
 Strand = Plus / Plus

                                                                      
Query: 19 atggtttgttttagcctgagctatgagtcatcggaatatgcatagcttcttgctaaaaca 78
          ||||||||||||||||||||||||| || ||  | |||| ||||||| ||||||||||||
Sbjct: 29 atggtttgttttagcctgagctatgtgttat-tgcatattcatagctacttgctaaaaca 87

                  
Query: 79 tgccaatc 86
          | ||||||
Sbjct: 88 taccaatc 95




>38578_crm-mir-355:mirbase
          Length = 112

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 61/70 (87%), Gaps = 1/70 (1%)
 Strand = Plus / Plus

                                                                      
Query: 17 gaatggtttgttttagcctgagctatgagtcatcggaatatgcatagcttcttgctaaaa 76
          ||||||||||||||||||||||||||| || ||  | | || |||||||||||| |||||
Sbjct: 23 gaatggtttgttttagcctgagctatgtgttat-tgcacatacatagcttcttgttaaaa 81

                    
Query: 77 catgccaatc 86
          ||| ||||||
Sbjct: 82 cataccaatc 91