miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38421_cel-mir-1829b:mirbase
          Length = 60

 Score = 67.9 bits (34), Expect = 7e-13
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                    
Query: 19 ttgtaaaaaatcgagtattacaaccattggaatttctctatt 60
          |||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 19 ttgtaaaacatcgagtattacaaccactggaatttctctatt 60




>38422_cel-mir-1829c:mirbase
          Length = 62

 Score = 60.0 bits (30), Expect = 2e-10
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                    
Query: 19 ttgtaaaaaatcgagtattacaaccattggaatttctctatt 60
          |||||||| |||||||| |||||||| |||||||||||||||
Sbjct: 19 ttgtaaaacatcgagtactacaaccactggaatttctctatt 60




>38459_cel-mir-4812:mirbase
          Length = 76

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                    
Query: 19 ttgtaaaaaatcgagtattacaaccattggaatttctctatt 60
          |||| |||||| |||||| ||||||| || ||||||||||||
Sbjct: 25 ttgtcaaaaattgagtatgacaaccactgcaatttctctatt 66