miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38453_cel-mir-4806:mirbase
          Length = 83

 Score =  165 bits (83), Expect = 6e-42
 Identities = 83/83 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ggattcagtggcgagccacttaccggctgagccatgcgcgctgcgctgcatagctcagcc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ggattcagtggcgagccacttaccggctgagccatgcgcgctgcgctgcatagctcagcc 60

                                 
Query: 61 ggtaagaggcttgcctttggagc 83
          |||||||||||||||||||||||
Sbjct: 61 ggtaagaggcttgcctttggagc 83



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 52/59 (88%), Gaps = 2/59 (3%)
 Strand = Plus / Minus

                                                                     
Query: 14 agccacttaccggctgagccatgc-gcgctgcgctgcatagctcagccggtaagaggct 71
          |||| |||||||||||||| |||| |||| |||| |||| |||||||||||||| ||||
Sbjct: 71 agcctcttaccggctgagctatgcagcgcagcgc-gcatggctcagccggtaagtggct 14