miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38421_cel-mir-1829b:mirbase
          Length = 60

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                     
Query: 24 gttgtcaaaaattgagtatgacaaccactgcaatttctctatt 66
          ||||| ||| || |||||| |||||||||| ||||||||||||
Sbjct: 18 gttgtaaaacatcgagtattacaaccactggaatttctctatt 60




>38420_cel-mir-1829a:mirbase
          Length = 60

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                    
Query: 25 ttgtcaaaaattgagtatgacaaccactgcaatttctctatt 66
          |||| |||||| |||||| ||||||| || ||||||||||||
Sbjct: 19 ttgtaaaaaatcgagtattacaaccattggaatttctctatt 60




>38422_cel-mir-1829c:mirbase
          Length = 62

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 44 acaaccactgcaatttctctatt 66
          |||||||||| ||||||||||||
Sbjct: 38 acaaccactggaatttctctatt 60