miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38149_cbr-mir-40:mirbase
Length = 116
Score = 63.9 bits (32), Expect = 3e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 37 ttcatcgcagtgatatgacgca-tcagtacattccttatcaccgggtgtacatcagctag 95
|||||||||||||||||||||| ||| |||| ||||||||||||||| |||||||||
Sbjct: 33 ttcatcgcagtgatatgacgcattcaaaccatttcttatcaccgggtgtcaatcagctag 92
Query: 96 ggtg 99
||||
Sbjct: 93 ggtg 96
>38274_cel-mir-40:mirbase
Length = 92
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 72 tatcaccgggtgtacatcagctagggtgcgggttcaggt 110
||||||||||||||||||||||| ||||||||| |||||
Sbjct: 54 tatcaccgggtgtacatcagctaaggtgcgggtacaggt 92
