miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38277_cel-mir-42:mirbase
Length = 95
Score = 79.8 bits (40), Expect = 4e-16
Identities = 75/85 (88%), Gaps = 5/85 (5%)
Strand = Plus / Plus
Query: 12 cggacctttgtggatgtttcctttttcggtgaagttgt--tccgttgaattatcttcttc 69
||||||||||||| ||||| |||||||||||||||||| ||||| | | |||||||
Sbjct: 5 cggacctttgtgggtgtttgctttttcggtgaagttgtcttccgtagctt---cttcttc 61
Query: 70 accgggttaacatctacagaggtcc 94
|||||||||||||||||||||||||
Sbjct: 62 accgggttaacatctacagaggtcc 86
>38152_cbr-mir-42:mirbase
Length = 96
Score = 67.9 bits (34), Expect = 1e-12
Identities = 79/93 (84%), Gaps = 7/93 (7%)
Strand = Plus / Plus
Query: 3 aacccttgtcggacctttgtggatgtttcctttttcggtgaagttgttccgttgaattat 62
|||||||||||||||||||||| |||| | |||||||||||||| | ||||
Sbjct: 2 aacccttgtcggacctttgtgggtgttcgccttttcggtgaagttact-----gaatg-- 54
Query: 63 cttcttcaccgggttaacatctacagaggtcct 95
|||||||||||||||||||||||||||||||||
Sbjct: 55 cttcttcaccgggttaacatctacagaggtcct 87
