miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38286_cel-mir-49:mirbase
          Length = 97

 Score = 75.8 bits (38), Expect = 6e-15
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                      
Query: 24 tccgcagtttcttatgatgtgctccgagccaacatgtgttcgaagcaccacgagaagctg 83
          |||||||||| || ||||||||||| ||| | |||| ||  |||||||||||||||||||
Sbjct: 19 tccgcagtttgttgtgatgtgctccaagcaatcatgagtctgaagcaccacgagaagctg 78

                    
Query: 84 cagatggagg 93
          ||||||||||
Sbjct: 79 cagatggagg 88




>38160_cbr-mir-49:mirbase
          Length = 96

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 64 cgaagcaccacgagaagctgcagatgga 91
          ||||||||||||||||||||||||||||
Sbjct: 59 cgaagcaccacgagaagctgcagatgga 86