miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38518_crm-mir-58a:mirbase
Length = 111
Score = 186 bits (94), Expect = 2e-48
Identities = 108/110 (98%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 1 cgtttgatgctcgccatatcc-attgccctactattcgcatctcatcacttcctccagta 59
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cgtttgatgctcgccatatcccattgccctactattcgcatctcatcacttcctccagta 61
Query: 60 atataaggatgagatcg-ttcagtacggcaatggaaagagctatataacg 108
||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 62 atataaggatgagatcgtttcagtacggcaatggaaagagctatataacg 111
>38296_cel-mir-58:mirbase
Length = 97
Score = 113 bits (57), Expect = 3e-26
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 9 gctcgccatatccattgccctactattcgcatctcatcacttcctccagtaatataagga 68
||||| |||||||||||||||||| |||||||||||||||||| |||| || ||| |||
Sbjct: 1 gctcgtcatatccattgccctactcttcgcatctcatcacttcgtccaataccataggga 60
Query: 69 tgagatcgttcagtacggcaatgga 93
|||||||||||||||||||||||||
Sbjct: 61 tgagatcgttcagtacggcaatgga 85
>38171_cbr-mir-58:mirbase
Length = 84
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 60 atataaggatgagatcgttcagtacggcaatggaa 94
|||||||||||||||||||||||||||||||||||
Sbjct: 50 atataaggatgagatcgttcagtacggcaatggaa 84
