miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38299_cel-mir-61:mirbase
          Length = 97

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                              
Query: 18 cgagttgggtcacggcgcttagtccttccgacatatggcaatgactagaacc 69
          |||| ||||| |||| |||||||||||||  | |||||||||||||||||||
Sbjct: 20 cgagatgggttacggggcttagtccttcctccgtatggcaatgactagaacc 71




>38173_cbr-mir-61:mirbase
          Length = 107

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                        
Query: 37 tagtccttccgacatatggcaatgactagaaccttggctcagctcg 82
          |||||||||||   ||||| |||||||||||||||| ||| |||||
Sbjct: 36 tagtccttccggtgtatggtaatgactagaaccttgactctgctcg 81