miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38182_cbr-mir-73:mirbase
          Length = 94

 Score = 75.8 bits (38), Expect = 6e-15
 Identities = 83/96 (86%), Gaps = 4/96 (4%)
 Strand = Plus / Plus

                                                                       
Query: 9   ggtccctcaaacgactgagcttccacgtcaagcctcagctatcgaatgaaaaattgctgg 68
           |||||||||||| || |||||||| ||||||||| ||||||||   |   | ||||||||
Sbjct: 2   ggtccctcaaacaaccgagcttccccgtcaagccacagctatc---tctgacattgctgg 58

                                               
Query: 69  caagatgtaggcagttcagttgtatg-cggagacca 103
           |||||||| ||||||||||||||||| |||||||||
Sbjct: 59  caagatgttggcagttcagttgtatgacggagacca 94




>38309_cel-mir-73:mirbase
          Length = 99

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 62 ttgctggcaagatgtaggcagttcagttgt 91
          ||||||||||||||||||||||||||||||
Sbjct: 58 ttgctggcaagatgtaggcagttcagttgt 87