miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38541_crm-mir-77-2:mirbase
Length = 120
Score = 91.7 bits (46), Expect = 1e-19
Identities = 72/82 (87%), Gaps = 9/82 (10%)
Strand = Plus / Plus
Query: 8 aaagagctgttagtttggatggctgtgctctgaggaaatacggctcataaaatgtcattt 67
|||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 11 aaagagctgttagtttggatggctgtgctctgaggaaacacgg---------tgtcattt 61
Query: 68 catcaggccatagctgtccaaa 89
||||||||||||||||||||||
Sbjct: 62 catcaggccatagctgtccaaa 83
>38313_cel-mir-77:mirbase
Length = 100
Score = 91.7 bits (46), Expect = 1e-19
Identities = 66/72 (91%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 20 gtttggatggctgtgctctgaggaaatacggctcataaaatgtcatttcatcaggccata 79
|||||||||| ||||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 19 gtttggatggttgtgctctgaggaaatacg---cacagaatgtcatttcatcaggccata 75
Query: 80 gctgtccaaatt 91
||||||||||||
Sbjct: 76 gctgtccaaatt 87
>38314_cel-mir-77:mirbase
Length = 100
Score = 91.7 bits (46), Expect = 1e-19
Identities = 66/72 (91%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 20 gtttggatggctgtgctctgaggaaatacggctcataaaatgtcatttcatcaggccata 79
|||||||||| ||||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 19 gtttggatggttgtgctctgaggaaatacg---cacagaatgtcatttcatcaggccata 75
Query: 80 gctgtccaaatt 91
||||||||||||
Sbjct: 76 gctgtccaaatt 87
>38188_cbr-mir-77-1:mirbase
Length = 96
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 59 atgtcatttcatcaggccatagctgtccaaatt 91
|||||||||||||||||||||||||||||||||
Sbjct: 54 atgtcatttcatcaggccatagctgtccaaatt 86
>38189_cbr-mir-77-2:mirbase
Length = 96
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 59 atgtcatttcatcaggccatagctgtccaaatt 91
|||||||||||||||||||||||||||||||||
Sbjct: 54 atgtcatttcatcaggccatagctgtccaaatt 86
