miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38191_cbr-mir-80:mirbase
Length = 100
Score = 135 bits (68), Expect = 7e-33
Identities = 83/88 (94%)
Strand = Plus / Plus
Query: 1 ggacactctttcgctcagctttcgacatgattctaaacaatacgtcgagacaatgttgtt 60
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 2 ggacactctttcgctcagctttcgacatgattctaaacaatacgctgtcgcaatgttgtt 61
Query: 61 gagatcattagttgaaagccgaacgatt 88
||||||||||||||||||||||||||||
Sbjct: 62 gagatcattagttgaaagccgaacgatt 89
>38317_cel-mir-80:mirbase
Length = 98
Score = 101 bits (51), Expect = 9e-23
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 1 ggacactctttcgctcagctttcgacatgattctaaacaatacgtcgagacaatgttgtt 60
|||||||| ||||||||||||||||||||||||| |||||| || | || | ||||||||
Sbjct: 3 ggacactcgttcgctcagctttcgacatgattctgaacaatccg-caagcccatgttgtt 61
Query: 61 gagatcattagttgaaagccgaa 83
|||||||||||||||||||||||
Sbjct: 62 gagatcattagttgaaagccgaa 84
>38318_cel-mir-80:mirbase
Length = 98
Score = 101 bits (51), Expect = 9e-23
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 1 ggacactctttcgctcagctttcgacatgattctaaacaatacgtcgagacaatgttgtt 60
|||||||| ||||||||||||||||||||||||| |||||| || | || | ||||||||
Sbjct: 3 ggacactcgttcgctcagctttcgacatgattctgaacaatccg-caagcccatgttgtt 61
Query: 61 gagatcattagttgaaagccgaa 83
|||||||||||||||||||||||
Sbjct: 62 gagatcattagttgaaagccgaa 84
