miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38193_cbr-mir-82:mirbase
Length = 95
Score = 93.7 bits (47), Expect = 2e-20
Identities = 74/82 (90%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 1 aagttcttctagcgacaggttttccctgtgatctgcagagtacaaaga--aatacatctg 58
|||||||||||||||||||||||| | |||||||||||||| | | || || |||||||
Sbjct: 1 aagttcttctagcgacaggttttcgccgtgatctgcagagttccatgaagaaaacatctg 60
Query: 59 agatcatcgtgaaagccagttg 80
||||||||||||||||||||||
Sbjct: 61 agatcatcgtgaaagccagttg 82
>38320_cel-mir-82:mirbase
Length = 97
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 55 tctgagatcatcgtgaaagccagttgttt 83
|||||||||||||||||||||||||||||
Sbjct: 59 tctgagatcatcgtgaaagccagttgttt 87
>38192_cbr-mir-81:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 54 atctgagatcatcgtgaaagccagttgtt 82
||||||||||||||||||||| |||||||
Sbjct: 54 atctgagatcatcgtgaaagctagttgtt 82
>38319_cel-mir-81:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 55 tctgagatcatcgtgaaagccagttgtt 82
|||||||||||||||||||| |||||||
Sbjct: 65 tctgagatcatcgtgaaagctagttgtt 92
>38544_crm-mir-81:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 54 atctgagatcatcgtgaaagccagttg 80
||||||||||||||||||||| |||||
Sbjct: 55 atctgagatcatcgtgaaagctagttg 81
