miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38194_cbr-mir-83:mirbase
Length = 111
Score = 135 bits (68), Expect = 7e-33
Identities = 89/96 (92%)
Strand = Plus / Plus
Query: 1 aggcaccactcggaaaaactgagtttatgtgtgtacttgacggccactcgagcaacgatc 60
|||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 6 aggcaccactcgaaaaaactgagtttatgtgtgtacttgacggcgatcagagcaacgatc 65
Query: 61 tagcaccatataaattcagtattttcgtggagagag 96
|||||||||||||||||||| |||||||||| ||||
Sbjct: 66 tagcaccatataaattcagtgttttcgtggacagag 101
>38321_cel-mir-83:mirbase
Length = 98
Score = 99.6 bits (50), Expect = 4e-22
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 3 gcaccactcggaaaaactgagtttatgtgtgtacttgacggcc-actcgagcaacgatct 61
||||||||||||| ||||| |||||||||||||||||||||| || ||||| ||||||
Sbjct: 2 gcaccactcggaaccactgaatttatgtgtgtacttgacggccaacaagagcatcgatct 61
Query: 62 agcaccatataaattcagtattttcg 87
|||||||||||||||||||| |||||
Sbjct: 62 agcaccatataaattcagtaatttcg 87
>38322_cel-mir-83:mirbase
Length = 98
Score = 99.6 bits (50), Expect = 4e-22
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 3 gcaccactcggaaaaactgagtttatgtgtgtacttgacggcc-actcgagcaacgatct 61
||||||||||||| ||||| |||||||||||||||||||||| || ||||| ||||||
Sbjct: 2 gcaccactcggaaccactgaatttatgtgtgtacttgacggccaacaagagcatcgatct 61
Query: 62 agcaccatataaattcagtattttcg 87
|||||||||||||||||||| |||||
Sbjct: 62 agcaccatataaattcagtaatttcg 87
