miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38332_cel-mir-230:mirbase
          Length = 98

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 55 tagtattagttgtgcgaccaggagacggtatt 86
          ||||||||||||||||||||||||||||||||
Sbjct: 59 tagtattagttgtgcgaccaggagacggtatt 90




>38203_cbr-mir-230:mirbase
          Length = 96

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 53 gatagtattagttgtgcgaccagga 77
          |||||||||||||||||||||||||
Sbjct: 55 gatagtattagttgtgcgaccagga 79



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 8  taccgatacttggtcgacaatctaatattatc 39
          ||||||||||||||||||||| ||||| ||||
Sbjct: 10 taccgatacttggtcgacaatttaatagtatc 41