miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38338_cel-mir-235:mirbase
          Length = 97

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 67  aatattgcactcgccccggcctgatctaaaagtaag 102
           |||||||||||| |||||||||||||| | ||||||
Sbjct: 59  aatattgcactctccccggcctgatctgagagtaag 94




>34949_xbo-mir-92a:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 66 taatattgcactcgccccggcctga 90
          |||||||||||||| ||||||||||
Sbjct: 47 taatattgcactcgtcccggcctga 71




>34875_sko-mir-92c:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 66 taatattgcactcgccccggcctg 89
          |||||||||||||| |||||||||
Sbjct: 58 taatattgcactcgtcccggcctg 81