miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38218_cbr-mir-242:mirbase
Length = 106
Score = 69.9 bits (35), Expect = 4e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 19 aagaatattgcgtaggcctttgcttcgaaagaaacactttactgttcgcagcaatctcct 78
|||||||||||||||||||||| ||||||||| || | ||||||||||||||||||
Sbjct: 21 aagaatattgcgtaggcctttgtttcgaaagacccaaaa-attgttcgcagcaatctcct 79
Query: 79 ccgcaatattttttg 93
||||||||||||||
Sbjct: 80 tcgcaatattttttg 94
>38346_cel-mir-242:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 9e-08
Identities = 53/61 (86%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 24 tattgcgtaggcctttgcttcgaaagaaacactttactgttcgcagcaatctcctccgca 83
||||||||||||||||||||||| ||| | ||| | |||||||||||| |||||||||
Sbjct: 14 tattgcgtaggcctttgcttcgagagagaagctt--cagttcgcagcaatatcctccgca 71
Query: 84 a 84
|
Sbjct: 72 a 72
