miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38570_crm-mir-246-2:mirbase
          Length = 96

 Score =  190 bits (96), Expect = 1e-49
 Identities = 96/96 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtccaaacaatagaacagcacctggccgatttcatgtaatatctgaaaagaaaagatat 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  agtccaaacaatagaacagcacctggccgatttcatgtaatatctgaaaagaaaagatat 60

                                              
Query: 61 tacatgtatcgggtaggagctgtttgagtaaaggat 96
          ||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacatgtatcgggtaggagctgtttgagtaaaggat 96




>38350_cel-mir-246:mirbase
          Length = 97

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 56 gatattacatgtatcgggtaggagctgtt 84
          |||||||||||| ||||||||||||||||
Sbjct: 57 gatattacatgtttcgggtaggagctgtt 85




>38221_cbr-mir-246:mirbase
          Length = 109

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 58 tattacatgtatcgggtaggagctgtt 84
          |||||||||||| ||||||||||||||
Sbjct: 63 tattacatgtattgggtaggagctgtt 89