miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38230_cbr-mir-259:mirbase
          Length = 95

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 10 aacgagtaaatctcatcctaatctggttg 38
          |||||||||||||||||||||||||||||
Sbjct: 10 aacgagtaaatctcatcctaatctggttg 38



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 55 tgctaccgatttggcttgggattgacttgt 84
          |||||||||||||| ||||||||| |||||
Sbjct: 55 tgctaccgatttggtttgggattggcttgt 84




>38364_cel-mir-259:mirbase
          Length = 101

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 10 aacgagtaaatctcatcctaatctggt 36
          |||||||||||||||||||||||||||
Sbjct: 12 aacgagtaaatctcatcctaatctggt 38



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 59 accgatttggcttgggattgacttgt 84
          ||||||||||| ||||||||||||||
Sbjct: 59 accgatttggcatgggattgacttgt 84