miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38613_ppc-mir-63c-4:mirbase
Length = 116
Score = 180 bits (91), Expect = 1e-46
Identities = 97/99 (97%)
Strand = Plus / Plus
Query: 5 catagtccatgtggggttccattcgcatgagtttcatggactcgattcatagatctatga 64
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cataatccatgtggggttccattcgcatgagtttcatggactcgattcatagatctatga 71
Query: 65 cactcaatgcgagatgggacctcggtgggccaatggttc 103
|||||||||||||||||||||||||||| ||||||||||
Sbjct: 72 cactcaatgcgagatgggacctcggtggaccaatggttc 110
>38611_ppc-mir-63c-2:mirbase
Length = 116
Score = 172 bits (87), Expect = 3e-44
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 5 catagtccatgtggggttccattcgcatgagtttcatggactcgattcatagatctatga 64
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cataatccatgcggggttccattcgcatgagtttcatggactcgattcatagatctatga 71
Query: 65 cactcaatgcgagatgggacctcggtgggccaatggttc 103
|||||||||||||||||||||||||||| ||||||||||
Sbjct: 72 cactcaatgcgagatgggacctcggtggaccaatggttc 110
>38612_ppc-mir-63c-3:mirbase
Length = 116
Score = 168 bits (85), Expect = 5e-43
Identities = 94/97 (96%)
Strand = Plus / Plus
Query: 5 catagtccatgtggggttccattcgcatgagtttcatggactcgattcatagatctatga 64
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cataatccatgtggggttccattcgcatgagtttcatggactcgattcatagatctatga 71
Query: 65 cactcaatgcgagatgggacctcggtgggccaatggt 101
|||||||||||||||||||||||||||| ||| ||||
Sbjct: 72 cactcaatgcgagatgggacctcggtggaccattggt 108
>38616_ppc-mir-63f:mirbase
Length = 102
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 16 tggggttccattcgcatgagtttcatggact 46
|||||||||||||| ||||||||||||||||
Sbjct: 15 tggggttccattcgtatgagtttcatggact 45
