miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38575_crm-mir-252:mirbase
          Length = 96

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 27 taagtagtagtgccgcaggtaacca 51
          |||||||||||||||||||||||||
Sbjct: 16 taagtagtagtgccgcaggtaacca 40




>38356_cel-mir-252:mirbase
          Length = 98

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 27 taagtagtagtgccgcaggtaacc 50
          ||||||||||||||||||||||||
Sbjct: 22 taagtagtagtgccgcaggtaacc 45




>38226_cbr-mir-252:mirbase
          Length = 99

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 27 taagtagtagtgccgcaggtaacc 50
          ||||||||||||||||||||||||
Sbjct: 17 taagtagtagtgccgcaggtaacc 40




>38769_cte-mir-252b:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 26 ctaagtagtagtgccgcaggtaa 48
          |||||||||||||||||||||||
Sbjct: 21 ctaagtagtagtgccgcaggtaa 43




>34835_spu-mir-252b:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 25 tctaagtagtagtgccgcaggta 47
          |||||||||||||||||||||||
Sbjct: 20 tctaagtagtagtgccgcaggta 42




>34893_sko-mir-252b:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 26 ctaagtagtagtgccgcaggtaa 48
          |||||||||||||||||||||||
Sbjct: 21 ctaagtagtagtgccgcaggtaa 43




>35018_dpu-mir-252b:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 26 ctaagtagtagtgccgcaggtaa 48
          |||||||||||||||||||||||
Sbjct: 21 ctaagtagtagtgccgcaggtaa 43




>34977_isc-mir-252b:mirbase
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 27 taagtagtagtgccgcaggtaa 48
          ||||||||||||||||||||||
Sbjct: 21 taagtagtagtgccgcaggtaa 42