miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38652_ppc-mir-2235-7:mirbase
Length = 90
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gggccgctcttgcccgctcattcaatattgccggtttgaacgaaattgatcagttcaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggccgctcttgcccgctcattcaatattgccggtttgaacgaaattgatcagttcaccg 60
Query: 61 ggagcattgtatgatcgggcttcggaccct 90
||||||||||||||||||||||||||||||
Sbjct: 61 ggagcattgtatgatcgggcttcggaccct 90
>38649_ppc-mir-2235-4:mirbase
Length = 90
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gggccgctcttgcccgctcattcaatattgccggtttgaacgaaattgatcagttcaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggccgctcttgcccgctcattcaatattgccggtttgaacgaaattgatcagttcaccg 60
Query: 61 ggagcattgtatgatcgggcttcggaccct 90
||||||||||||||||||||||||||||||
Sbjct: 61 ggagcattgtatgatcgggcttcggaccct 90
>38648_ppc-mir-2235-3:mirbase
Length = 90
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gggccgctcttgcccgctcattcaatattgccggtttgaacgaaattgatcagttcaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggccgctcttgcccgctcattcaatattgccggtttgaacgaaattgatcagttcaccg 60
Query: 61 ggagcattgtatgatcgggcttcggaccct 90
||||||||||||||||||||||||||||||
Sbjct: 61 ggagcattgtatgatcgggcttcggaccct 90
>38646_ppc-mir-2235-1:mirbase
Length = 90
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gggccgctcttgcccgctcattcaatattgccggtttgaacgaaattgatcagttcaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggccgctcttgcccgctcattcaatattgccggtttgaacgaaattgatcagttcaccg 60
Query: 61 ggagcattgtatgatcgggcttcggaccct 90
||||||||||||||||||||||||||||||
Sbjct: 61 ggagcattgtatgatcgggcttcggaccct 90
>38651_ppc-mir-2235-6:mirbase
Length = 90
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 1 gggccgctcttgcccgctcattcaatattgccggtttgaacgaaattgatcagttcaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggccgctcttgcccgctcattcaatattgccggtttgaacgaaattgatcagttcaccg 60
Query: 61 ggagcattgtatgatcgggcttcggaccct 90
||||||||||||||||||| ||||||||||
Sbjct: 61 ggagcattgtatgatcgggattcggaccct 90
>38650_ppc-mir-2235-5:mirbase
Length = 90
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 1 gggccgctcttgcccgctcattcaatattgccggtttgaacgaaattgatcagttcaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggccgctcttgcccgctcattcaatattgccggtttgaacgaaattgatcagttcaccg 60
Query: 61 ggagcattgtatgatcgggcttcggaccct 90
||||||||||||||||||||||| ||||||
Sbjct: 61 ggagcattgtatgatcgggcttcagaccct 90
>38653_ppc-mir-2235-8:mirbase
Length = 87
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 4 ccgctcttgcccgctcattcaatattgccggtttgaacgaaattgatcagttcaccggga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ccgctcttgcccgctcattcaatattgccggtttgaacgaaattgatcagttcaccggga 62
Query: 64 gcattgtatgatcgggcttcggacc 88
|||||||||||||||||||||||||
Sbjct: 63 gcattgtatgatcgggcttcggacc 87
