miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38735_cte-mir-29a:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagttt 82
||||||||||||||||||||||||
Sbjct: 59 tctagcaccatttgaaatcagttt 82
>25451_pma-mir-29a:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagtt 81
|||||||||||||||||||||||
Sbjct: 48 tctagcaccatttgaaatcagtt 70
>34867_sko-mir-29a:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 56 tcctctagcaccatttgaaatcagttt 82
|||||||||||||| ||||||||||||
Sbjct: 56 tcctctagcaccatatgaaatcagttt 82
>24655_bfl-mir-29b:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 60 tctagcaccatttgaaatcagt 81
>25453_pma-mir-29c:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 53 tctagcaccatttgaaatcagt 74
>25728_xtr-mir-29b:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 49 tctagcaccatttgaaatcagt 70
>25912_gga-mir-29b-1:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 49 tctagcaccatttgaaatcagt 70
>25913_gga-mir-29b-2:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 49 tctagcaccatttgaaatcagt 70
>26419_tgu-mir-29b-1:mirbase
Length = 71
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 39 tctagcaccatttgaaatcagt 60
>26420_tgu-mir-29b-2:mirbase
Length = 71
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 39 tctagcaccatttgaaatcagt 60
>26649_cfa-mir-29b-1:mirbase
Length = 65
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 41 tctagcaccatttgaaatcagt 62
>26650_cfa-mir-29b-2:mirbase
Length = 66
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 42 tctagcaccatttgaaatcagt 63
>26971_eca-mir-29b:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 49 tctagcaccatttgaaatcagt 70
>26972_eca-mir-29b-2:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 50 tctagcaccatttgaaatcagt 71
>27355_mdo-mir-29b:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 53 tctagcaccatttgaaatcagt 74
>27494_age-mir-29b:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 49 tctagcaccatttgaaatcagt 70
>27554_lla-mir-29b:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 49 tctagcaccatttgaaatcagt 70
>27602_sla-mir-29b:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 50 tctagcaccatttgaaatcagt 71
>27677_mml-mir-29b-1:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 49 tctagcaccatttgaaatcagt 70
>27678_mml-mir-29b-2:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 50 tctagcaccatttgaaatcagt 71
>28190_mne-mir-29b:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 50 tctagcaccatttgaaatcagt 71
>28276_ggo-mir-29b-1:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 49 tctagcaccatttgaaatcagt 70
>28277_ggo-mir-29b-2:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 50 tctagcaccatttgaaatcagt 71
>28388_hsa-mir-29b-1:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 49 tctagcaccatttgaaatcagt 70
>28389_hsa-mir-29b-2:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 50 tctagcaccatttgaaatcagt 71
>30063_ppa-mir-29b-1:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 49 tctagcaccatttgaaatcagt 70
>30064_ppa-mir-29b-2:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 50 tctagcaccatttgaaatcagt 71
>30173_ptr-mir-29b-1:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 49 tctagcaccatttgaaatcagt 70
>30174_ptr-mir-29b-2:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 50 tctagcaccatttgaaatcagt 71
>30778_ppy-mir-29b-1:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 49 tctagcaccatttgaaatcagt 70
>30779_ppy-mir-29b-2:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 50 tctagcaccatttgaaatcagt 71
>31448_oan-mir-29b-1:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 74 tctagcaccatttgaaatcagt 95
>31449_oan-mir-29b-2:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 50 tctagcaccatttgaaatcagt 71
>31803_mmu-mir-29b-1:mirbase
Length = 71
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 45 tctagcaccatttgaaatcagt 66
>31804_mmu-mir-29b-2:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 50 tctagcaccatttgaaatcagt 71
>32684_rno-mir-29b-1:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 49 tctagcaccatttgaaatcagt 70
>32685_rno-mir-29b-2:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 50 tctagcaccatttgaaatcagt 71
>33086_rno-mir-3587:mirbase
Length = 63
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 60 tctagcaccatttgaaatcagt 39
>33159_bta-mir-29b-1:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 49 tctagcaccatttgaaatcagt 70
>33160_bta-mir-29b-2:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 50 tctagcaccatttgaaatcagt 71
>33936_ssc-mir-29b:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 49 tctagcaccatttgaaatcagt 70
>34244_dre-mir-29b-1:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 50 tctagcaccatttgaaatcagt 71
>34245_dre-mir-29b-2:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 54 tctagcaccatttgaaatcagt 75
>34246_dre-mir-29b-3:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 53 tctagcaccatttgaaatcagt 74
>34571_fru-mir-29b-1:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 48 tctagcaccatttgaaatcagt 69
>34572_fru-mir-29b-2:mirbase
Length = 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 43 tctagcaccatttgaaatcagt 64
>34718_tni-mir-29b-1:mirbase
Length = 79
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 48 tctagcaccatttgaaatcagt 69
>34719_tni-mir-29b-2:mirbase
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 47 tctagcaccatttgaaatcagt 68
>34868_sko-mir-29b:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatttgaaatcagt 80
||||||||||||||||||||||
Sbjct: 59 tctagcaccatttgaaatcagt 80
>35355_ame-mir-29b:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 ctagcaccatttgaaatcagt 80
|||||||||||||||||||||
Sbjct: 66 ctagcaccatttgaaatcagt 86
>37574_ngi-mir-29b:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 ctagcaccatttgaaatcagt 80
|||||||||||||||||||||
Sbjct: 60 ctagcaccatttgaaatcagt 80
>37642_nvi-mir-29b:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 ctagcaccatttgaaatcagt 80
|||||||||||||||||||||
Sbjct: 65 ctagcaccatttgaaatcagt 85
>38736_cte-mir-29b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagt 80
||||||||||||||||||||
Sbjct: 61 tagcaccatttgaaatcagt 80
>34983_isc-mir-285:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 58 ctctagcaccatttgaaatcagtt 81
||||||||||||||||| ||||||
Sbjct: 58 ctctagcaccatttgaattcagtt 81
