miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38745_cte-mir-87b:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 aggtgagcaaagtttcaggtgtatc 83
|||||||||||||||||||||||||
Sbjct: 59 aggtgagcaaagtttcaggtgtatc 83
>35361_ame-mir-87-1:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 aaggtgagcaaagtttcaggtgt 80
|||||||||||||||||||||||
Sbjct: 67 aaggtgagcaaagtttcaggtgt 89
>38628_ppc-mir-87:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 aggtgagcaaagtttcaggtgt 80
||||||||||||||||||||||
Sbjct: 59 aggtgagcaaagtttcaggtgt 80
>38550_crm-mir-87:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 aggtgagcaaagtttcaggtgt 80
||||||||||||||||||||||
Sbjct: 62 aggtgagcaaagtttcaggtgt 83
>34968_isc-mir-87:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 aggtgagcaaagtttcaggtgt 80
||||||||||||||||||||||
Sbjct: 59 aggtgagcaaagtttcaggtgt 80
>35056_api-mir-87a:mirbase
Length = 66
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 aggtgagcaaagtttcaggtgt 80
||||||||||||||||||||||
Sbjct: 43 aggtgagcaaagtttcaggtgt 64
>38108_bma-mir-87a:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 aggtgagcaaagtttcaggtgt 80
||||||||||||||||||||||
Sbjct: 49 aggtgagcaaagtttcaggtgt 70
>38198_cbr-mir-87:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 aggtgagcaaagtttcaggtgt 80
||||||||||||||||||||||
Sbjct: 59 aggtgagcaaagtttcaggtgt 80
>38327_cel-mir-87:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 aggtgagcaaagtttcaggtgt 80
||||||||||||||||||||||
Sbjct: 59 aggtgagcaaagtttcaggtgt 80
>38941_emu-mir-87:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 ggtgagcaaagtttcaggtgt 80
|||||||||||||||||||||
Sbjct: 72 ggtgagcaaagtttcaggtgt 92
>38918_egr-mir-87:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 ggtgagcaaagtttcaggtgt 80
|||||||||||||||||||||
Sbjct: 72 ggtgagcaaagtttcaggtgt 92
>38744_cte-mir-87a:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 ggtgagcaaagtttcaggtgt 80
|||||||||||||||||||||
Sbjct: 60 ggtgagcaaagtttcaggtgt 80
>35362_ame-mir-87-2:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 ggtgagcaaagtttcaggtgt 80
|||||||||||||||||||||
Sbjct: 69 ggtgagcaaagtttcaggtgt 89
>37727_tca-mir-87a:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 ggtgagcaaagtttcaggtgt 80
|||||||||||||||||||||
Sbjct: 51 ggtgagcaaagtttcaggtgt 71
>37728_tca-mir-87a:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 ggtgagcaaagtttcaggtgt 80
|||||||||||||||||||||
Sbjct: 51 ggtgagcaaagtttcaggtgt 71
>35057_api-mir-87b:mirbase
Length = 63
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 aaggtgagcaaagtttcagg 77
||||||||||||||||||||
Sbjct: 39 aaggtgagcaaagtttcagg 58
>38109_bma-mir-87b:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 57 gaaggtgagcaaagtttcaggtgt 80
||||||||||||||| ||||||||
Sbjct: 44 gaaggtgagcaaagtctcaggtgt 67
