miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>24672_bfl-mir-100:mirbase
          Length = 100

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||||
Sbjct: 18 ataaacccgtagatccgaacttgtg 42




>25755_xtr-mir-100:mirbase
          Length = 76

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||||
Sbjct: 7  ataaacccgtagatccgaacttgtg 31




>34877_sko-mir-100:mirbase
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 19 taaacccgtagatccgaacttgtg 42
          ||||||||||||||||||||||||
Sbjct: 19 taaacccgtagatccgaacttgtg 42




>25468_pma-mir-100a:mirbase
          Length = 89

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 16 aaacccgtagatccgaacttgtg 38




>25470_pma-mir-100c:mirbase
          Length = 88

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 71 aaacccgtagatccgaacttgtg 49




>25930_gga-mir-100:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>26440_tgu-mir-100-1:mirbase
          Length = 111

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 10 aaacccgtagatccgaacttgtg 32




>26441_tgu-mir-100-2:mirbase
          Length = 111

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 10 aaacccgtagatccgaacttgtg 32




>27364_mdo-mir-100:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>27501_age-mir-100:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>27563_lla-mir-100:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>27610_sla-mir-100:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>27704_mml-mir-100:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>28293_ggo-mir-100:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>28414_hsa-mir-100:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>30080_ppa-mir-100:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>30198_ptr-mir-100:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>30803_ppy-mir-100:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>31471_oan-mir-100:mirbase
          Length = 81

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 13 aaacccgtagatccgaacttgtg 35




>31827_mmu-mir-100:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>32708_rno-mir-100:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>33187_bta-mir-100:mirbase
          Length = 76

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>33958_ssc-mir-100:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 15 aaacccgtagatccgaacttgtg 37




>34263_dre-mir-100-1:mirbase
          Length = 96

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 23 aaacccgtagatccgaacttgtg 45




>34264_dre-mir-100-2:mirbase
          Length = 75

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 10 aaacccgtagatccgaacttgtg 32




>34579_fru-mir-100:mirbase
          Length = 63

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 4  aaacccgtagatccgaacttgtg 26




>34726_tni-mir-100:mirbase
          Length = 63

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 4  aaacccgtagatccgaacttgtg 26




>35288_aga-mir-100:mirbase
          Length = 92

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 aaacccgtagatccgaacttgtg 42
          |||||||||||||||||||||||
Sbjct: 14 aaacccgtagatccgaacttgtg 36




>26997_eca-mir-100:mirbase
          Length = 55

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 aacccgtagatccgaacttgtg 42
          ||||||||||||||||||||||
Sbjct: 1  aacccgtagatccgaacttgtg 22




>30802_ppy-mir-99a:mirbase
          Length = 81

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 18 ataaacccgtagatccgaacttgtgataaa 47
          |||||||||||||||||| |||||| ||||
Sbjct: 10 ataaacccgtagatccgatcttgtggtaaa 39




>34261_dre-mir-99-1:mirbase
          Length = 84

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 21 aacccgtagatccgaacttgtgataa 46
          ||||||||||||||| ||||||||||
Sbjct: 14 aacccgtagatccgatcttgtgataa 39




>34970_isc-mir-100:mirbase
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 aacccgtagatccgaacttgtg 42
          ||||||||||||||||||||||
Sbjct: 21 aacccgtagatccgaacttgtg 42




>35010_dpu-mir-100:mirbase
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 aacccgtagatccgaacttgtg 42
          ||||||||||||||||||||||
Sbjct: 21 aacccgtagatccgaacttgtg 42




>35190_aae-mir-100:mirbase
          Length = 126

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 aacccgtagatccgaacttgtg 42
          ||||||||||||||||||||||
Sbjct: 31 aacccgtagatccgaacttgtg 52




>35366_ame-mir-100:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 aacccgtagatccgaacttgtg 42
          ||||||||||||||||||||||
Sbjct: 19 aacccgtagatccgaacttgtg 40




>35537_bmo-mir-100:mirbase
          Length = 142

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 aacccgtagatccgaacttgtg 42
          ||||||||||||||||||||||
Sbjct: 21 aacccgtagatccgaacttgtg 42




>36020_cqu-mir-100:mirbase
          Length = 110

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 aacccgtagatccgaacttgtg 42
          ||||||||||||||||||||||
Sbjct: 23 aacccgtagatccgaacttgtg 44




>37648_nvi-mir-100:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 aacccgtagatccgaacttgtg 42
          ||||||||||||||||||||||
Sbjct: 19 aacccgtagatccgaacttgtg 40




>37737_tca-mir-100:mirbase
          Length = 76

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 aacccgtagatccgaacttgtg 42
          ||||||||||||||||||||||
Sbjct: 10 aacccgtagatccgaacttgtg 31




>37738_tca-mir-100:mirbase
          Length = 76

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 aacccgtagatccgaacttgtg 42
          ||||||||||||||||||||||
Sbjct: 10 aacccgtagatccgaacttgtg 31




>38112_bma-mir-100b:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 aacccgtagatccgaacttgtg 42
          ||||||||||||||||||||||
Sbjct: 21 aacccgtagatccgaacttgtg 42




>39244_nve-mir-100:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 acccgtagatccgaacttgtg 42
          |||||||||||||||||||||
Sbjct: 17 acccgtagatccgaacttgtg 37




>25754_xtr-mir-99:mirbase
          Length = 71

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 5  ataaacccgtagatccgatcttgtg 29




>25929_gga-mir-99a:mirbase
          Length = 81

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 10 ataaacccgtagatccgatcttgtg 34




>26439_tgu-mir-99-2:mirbase
          Length = 71

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 8  ataaacccgtagatccgatcttgtg 32




>26438_tgu-mir-99-1:mirbase
          Length = 71

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 8  ataaacccgtagatccgatcttgtg 32




>26995_eca-mir-99a-2:mirbase
          Length = 81

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 10 ataaacccgtagatccgatcttgtg 34




>27562_lla-mir-99a:mirbase
          Length = 81

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 10 ataaacccgtagatccgatcttgtg 34




>27702_mml-mir-99a:mirbase
          Length = 81

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 10 ataaacccgtagatccgatcttgtg 34




>28201_mne-mir-99a:mirbase
          Length = 81

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 10 ataaacccgtagatccgatcttgtg 34




>28292_ggo-mir-99a:mirbase
          Length = 81

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 10 ataaacccgtagatccgatcttgtg 34




>28412_hsa-mir-99a:mirbase
          Length = 81

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 10 ataaacccgtagatccgatcttgtg 34




>30079_ppa-mir-99a:mirbase
          Length = 81

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 10 ataaacccgtagatccgatcttgtg 34




>30196_ptr-mir-99a:mirbase
          Length = 81

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 10 ataaacccgtagatccgatcttgtg 34




>31470_oan-mir-99:mirbase
          Length = 102

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 21 ataaacccgtagatccgatcttgtg 45




>31825_mmu-mir-99a:mirbase
          Length = 65

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 2  ataaacccgtagatccgatcttgtg 26




>32706_rno-mir-99a:mirbase
          Length = 81

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 10 ataaacccgtagatccgatcttgtg 34




>33185_bta-mir-99a:mirbase
          Length = 81

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 10 ataaacccgtagatccgatcttgtg 34




>33956_ssc-mir-99a:mirbase
          Length = 80

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 18 ataaacccgtagatccgaacttgtg 42
          |||||||||||||||||| ||||||
Sbjct: 9  ataaacccgtagatccgatcttgtg 33




>35062_api-mir-100:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 acccgtagatccgaacttgtg 42
          |||||||||||||||||||||
Sbjct: 22 acccgtagatccgaacttgtg 42