miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36113_dan-mir-263a:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 15 acagtgaatggcactggtagaattcacggtgtaa 48
||||| ||||||||||| ||||||||||| ||||
Sbjct: 9 acagttaatggcactggaagaattcacggggtaa 42
>36405_dme-mir-263a:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 15 acagtgaatggcactggtagaattcacggtgtaa 48
||||| ||||||||||| ||||||||||| ||||
Sbjct: 12 acagttaatggcactggaagaattcacggggtaa 45
>36406_dme-mir-263a:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 15 acagtgaatggcactggtagaattcacggtgtaa 48
||||| ||||||||||| ||||||||||| ||||
Sbjct: 12 acagttaatggcactggaagaattcacggggtaa 45
>37151_dse-mir-263a:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 15 acagtgaatggcactggtagaattcacggtgtaa 48
||||| ||||||||||| ||||||||||| ||||
Sbjct: 10 acagttaatggcactggaagaattcacggggtaa 43
>37230_dsi-mir-263a:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 15 acagtgaatggcactggtagaattcacggtgtaa 48
||||| ||||||||||| ||||||||||| ||||
Sbjct: 10 acagttaatggcactggaagaattcacggggtaa 43
>25808_xtr-mir-183:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcacggtgtaaac 50
|||||||||||||||||||| ||| ||||
Sbjct: 20 atggcactggtagaattcactgtgaaaac 48
>27407_mdo-mir-183:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcacggtgtaaac 50
|||||||||||||||||||| ||| ||||
Sbjct: 16 atggcactggtagaattcactgtgaaaac 44
>31514_oan-mir-183:mirbase
Length = 131
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcacggtgtaaac 50
|||||||||||||||||||| ||| ||||
Sbjct: 32 atggcactggtagaattcactgtgaaaac 60
>36191_der-mir-263a:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 15 acagtgaatggcactggtagaattcacgg 43
||||| ||||||||||| |||||||||||
Sbjct: 10 acagttaatggcactggaagaattcacgg 38
>36280_dgr-mir-263a:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 15 acagtgaatggcactggtagaattcacgg 43
||||| ||||||||||| |||||||||||
Sbjct: 9 acagttaatggcactggaagaattcacgg 37
>36789_dmo-mir-263a:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 15 acagtgaatggcactggtagaattcacgg 43
||||| ||||||||||| |||||||||||
Sbjct: 9 acagttaatggcactggaagaattcacgg 37
>36865_dpe-mir-263a:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 15 acagtgaatggcactggtagaattcacgg 43
||||| ||||||||||| |||||||||||
Sbjct: 10 acagttaatggcactggaagaattcacgg 38
>36944_dps-mir-263a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 15 acagtgaatggcactggtagaattcacgg 43
||||| ||||||||||| |||||||||||
Sbjct: 11 acagttaatggcactggaagaattcacgg 39
>37105_dps-mir-3983:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 15 acagtgaatggcactggtagaattcacgg 43
||||| ||||||||||| |||||||||||
Sbjct: 79 acagttaatggcactggaagaattcacgg 51
>37365_dvi-mir-263a:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 15 acagtgaatggcactggtagaattcacgg 43
||||| ||||||||||| |||||||||||
Sbjct: 9 acagttaatggcactggaagaattcacgg 37
>37444_dwi-mir-263a:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 15 acagtgaatggcactggtagaattcacgg 43
||||| ||||||||||| |||||||||||
Sbjct: 9 acagttaatggcactggaagaattcacgg 37
>37519_dya-mir-263a:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 15 acagtgaatggcactggtagaattcacgg 43
||||| ||||||||||| |||||||||||
Sbjct: 10 acagttaatggcactggaagaattcacgg 38
>24687_bfl-mir-183:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 22 atggcactggtagaattcac 41
>24843_cin-mir-183:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 17 atggcactggtagaattcac 36
>25508_pma-mir-183:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 16 atggcactggtagaattcac 35
>25978_gga-mir-183:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 16 atggcactggtagaattcac 35
>26738_cfa-mir-183:mirbase
Length = 62
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 2 atggcactggtagaattcac 21
>27064_eca-mir-183:mirbase
Length = 69
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 7 atggcactggtagaattcac 26
>27621_sla-mir-183:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 28 atggcactggtagaattcac 47
>27774_mml-mir-183:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 28 atggcactggtagaattcac 47
>28224_mne-mir-183:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 28 atggcactggtagaattcac 47
>28317_ggo-mir-183:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 28 atggcactggtagaattcac 47
>28490_hsa-mir-183:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 28 atggcactggtagaattcac 47
>30106_ppa-mir-183:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 28 atggcactggtagaattcac 47
>30258_ptr-mir-183:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 28 atggcactggtagaattcac 47
>30872_ppy-mir-183:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 25 atggcactggtagaattcac 44
>31899_mmu-mir-183:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 7 atggcactggtagaattcac 26
>32769_rno-mir-183:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 28 atggcactggtagaattcac 47
>33041_rno-mir-3553:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 80 atggcactggtagaattcac 61
>33251_bta-mir-183:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 7 atggcactggtagaattcac 26
>34013_ssc-mir-183:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 7 atggcactggtagaattcac 26
>34334_dre-mir-183:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 17 atggcactggtagaattcac 36
>34615_fru-mir-183:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 7 atggcactggtagaattcac 26
>34762_tni-mir-183:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 7 atggcactggtagaattcac 26
>37761_tca-mir-263a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gaatggcactggtagaattcacgg 43
|||||||||||| |||||||||||
Sbjct: 17 gaatggcactggaagaattcacgg 40
>37762_tca-mir-263a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gaatggcactggtagaattcacgg 43
|||||||||||| |||||||||||
Sbjct: 17 gaatggcactggaagaattcacgg 40
