miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38759_cte-mir-190:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 22 agatatgtttgatatacttggtggt 46
          |||||||||||||||| ||||||||
Sbjct: 22 agatatgtttgatatatttggtggt 46




>35197_aae-mir-190:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 22 agatatgtttgatatacttggtggttaa 49
          ||||||||||||||| |||||| |||||
Sbjct: 15 agatatgtttgatattcttggttgttaa 42




>35294_aga-mir-190:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 22 agatatgtttgatatacttggtggttaa 49
          ||||||||||||||| |||||| |||||
Sbjct: 24 agatatgtttgatattcttggttgttaa 51




>36026_cqu-mir-190-1:mirbase
          Length = 90

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 22 agatatgtttgatatacttggtggttaa 49
          ||||||||||||||| |||||| |||||
Sbjct: 15 agatatgtttgatattcttggttgttaa 42




>36027_cqu-mir-190-2:mirbase
          Length = 90

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 22 agatatgtttgatatacttggtggttaa 49
          ||||||||||||||| |||||| |||||
Sbjct: 15 agatatgtttgatattcttggttgttaa 42